Decider for creating a map or a table based on whether all NUTS_ids are found in the shapefile

Usage

create_map_or_table(
  signals_agg,
  data_surveillance,
  region,
  shape = get_shp_config_or_internal(),
  interactive = TRUE,
  toggle_alarms = FALSE,
  partial = FALSE
)

Arguments

signals_agg: tibble, aggregated signals over n weeks with columns number of cases, any_alarms and n_alarms aggregate_signals. This tibble can contain the aggregated signals for multiple categories i.e. state and county.
data_surveillance: data.frame, surveillance linelist
region: character, specifying the variable for the region to be shown should be one of ("country","state", "county","community","region_level1", "region_level2","region_level3")
shape: sf. The shapefile used for mapping. - If an external shapefile path is provided in the configuration file, it is used. - Otherwise, the function defaults to the internal European shapefile (`nuts_shp`). - By default, this parameter is set to `get_shp_config_or_internal()`, which handles this logic dynamically.
interactive: boolean identifying whether the plot should be static or interactive
toggle_alarms: boolean identifying whether the plot should showing number of signals explicitly or only when hovering
partial: logical, add partial bundle to plotly

Value

a table or a plot depending on whether the matching of the NUTS IDs was fully possible, the table and plots can be interactive or not depening on the interactive parameter, can be class "ggplot" or "plotly" for plot and class "gt_tbl" or "datatables" for table

Examples

if (FALSE) { # \dontrun{
signals <- input_example %>%
  preprocess_data() %>%
  get_signals(stratification = c("sex", "county"))
signals_agg <- signals %>% aggregate_signals(number_of_weeks = 6)
create_map_or_table(signals_agg, input_example, "county", nuts_shp)
} # }